In this study, we evaluated the impact of aging, in terms of chronological age, on the CD4+ T-cell recovery in HIV-infected patients with successful viral suppression. To our knowledge, this is the first semi-mechanistic population model describing longitudinal CD4+ T-cell dynamics under ART treatment, incorporating the evaluation of important immune biomarkers. Using T-cell subtype biomarker data, we divided the total T-cell kinetics into naïve and memory T-cell dynamics, enabling a more mechanistic evaluation of aging effects on CD4+ T-cell recovery. Our analysis highlights that older age may be a predictor of suboptimal immune recovery by influencing CD4+ naïve T-cell homeostasis. Among the three age groups (18- < 35, 35- < 50 and ≥ 50), the percentages of simulated participants achieving sufficient immune reconstitution were 42, 32 and 26% at the first year after ART treatment, and 81, 72 and 65% at steady state, respectively. The differences of CD4+ T-cell recovery between age groups increased over time, indicating that the negative impact of older age on CD4+ T-cell recovery becomes more profound with longer follow up. We also observed that thymus output, immune activation and immune exhaustion affected immune reconstitution.

The model describes naïve and total CD4+ T-cell simultaneously. According to the current data, the naïve T-cell dynamics are described using a zero-order input and a cell density-dependent elimination process. The memory T-cells are converted from the naïve T-cells with a first-order process and are eliminated following a cell density-dependent elimination process. Our data did not support the estimation of the proliferation process, even with different variations in parameterization. We chose not to fix the proliferation parameter to the literature values due to the large variation and uncertainty in this estimate; previous studies using isotope labeling methods measured the proliferation rate for total T-cells without differentiating naïve and memory T-cells as we did [16, 20]. In studies quantifying thymus output and proliferation, instead of fitting the data, the proliferation rate was studied in an exploratory manner by simulating different CD4+ T-cell dynamic scenarios, therefore those values were theoretical and no validation was performed [8, 20]. Therefore, we chose to define the apparent elimination in our model as a combination of the cell proliferation and of cell death, with the rate proportional to the number of cells in the compartment.

The model was developed using data from two cohorts, which represented long-term (ACTG) and short term (BLIR) CD4+ T-cell recovery profiles, respectively. The model was primarily developed from the ACTG model with a larger sample size (n = 102), and the model was able to well-describe the data from the BLIR study (n = 20). To minimize the variability in measuring the biomarkers, the gating strategies from the ACTG study were applied to the BLIR study data as much as possible. In the final model, different residual error models were used for ACTG data (proportional) and BLIR data (proportional + additive), however, the proportional error residuals were similar between the two studies and therefore combined in one term for both total and naïve T-cell observations.

The stepwise covariate analysis in the model suggested that age at ART initiation was positively associated with the apparent naïve T-cell elimination rate constant, the parameter describing both naïve cell proliferation and death. The literature findings support the negative association between age and cell proliferation. It is possible that aging is associated with cell replicative senescence as a result of age-dependent DNA demethylation [22]. A study that directly measured cell proliferation rate of CD4+ T-cells in mice using a DNA labeling method showed that there was a two-fold drop of proliferation rates of T-cells in thymus with aging in two different mice strains [23]. On the other hand, a previous study showed a 3-fold increase in the half-life of naïve T-cells in aged mice compared to younger ones, suggesting an extended cell life span, or slower cell death, as protective mechanism for naïve T-cell pool in elderly, which is contrary to the positive relationship between age and cell death. Therefore, we propose that aging impairs CD4+ T-cell recovery by decelerating naïve T-cell proliferation. Our analysis showed that a 10-year increase in age is associated with a 4% increase in the apparent naïve T-cell elimination rate constant. In terms of CD4+ total T-cell counts, simulation showed that steady state median CD4+ T-cell counts decrease by 13 and 20% in a patient aged 40 years and 50 years, respectively, compared to a patient aged 30 years. However, these changes are not profound compared to the large variability in CD4+ T-cell counts (~ 30% coefficient of variance) [24], and their clinical significance is likely minimal. The current simulation does not account for the reduced thymus function and impaired immune response in older individuals (e.g. reduced responses to vaccination). The T-cell receptor (TCR) repertoire undergoes contraction with age, and the reduced TCR repertoire, combined with the inadequate T-cell reconstitution after ART initiation, may amplify the defects observed in immune recovery in older HIV-infected subjects. Further investigation on CD4+ T-cell functions is warranted to better evaluate the clinical importance of these findings.

In our analysis, female sex was favorably associated with CD4+ T-cell recovery as it reduced the apparent memory T-cell elimination rate by 48%. As discussed above, the interpretation of this relationship could be multidirectional. Though the mechanism has not been clearly elucidated, it has been hypothesized that female hormones provide a beneficial environment for CD4+ T-cell homeostasis, both in the general [25] and the HIV-infected population [26]. Our simulation showed that at steady state, the median change in CD4+ T-cell counts from baseline was 592 cells/μL (IQR 474-704) in female and 416 cells/μL (IQR 348-463) in male, with a ~ 42% increase in females compared to males. Our analysis associated higher HIV viral load at ART initiation with lower naïve and memory T-cells. Moreover, a one-log increase in viral load had a greater impact on naïve T-cell baseline compared to that of memory T-cells (decrease by 65% versus 42%). In addition, higher level of CD4+ T-cell activation was associated with lower memory T-cell baseline, which might be a result of increased activation-induced T-cell apoptosis [27].

Thymic output is the mechanism for naïve T-cell generation. The current post hoc analysis with the 20 subjects in the BLIR study suggested a strong association between CD31 expression on naïve T-cells and naïve T-cell production rate (P < 0.001). This finding is consistent with the well-delineated relationship between thymus involution and aging in the literature [7, 8]. The activation level on CD4+ T-cell was nominally associated with the activation rate constant of the conversion from naïve to memory T-cells, however, this effect was not detected in the final model, probably due to the adjustment for immune activation on the baseline memory T-cells. However, we found that a higher activation rate was significantly associated with higher immune exhaustion (Fig. 4). Immune exhaustion is characterized by a progressive loss of T-cell functions, and commonly develops during viral-persistence in HIV infection as a result of chronic immune activation and persists even in individuals fully suppressed on ART [28]. Our analysis suggested that the higher level of immune exhaustion was unfavorable for naïve T-cell restoration as a result of increased activation rate.

Our study has several strengths and provides a new way to approach longitudinal CD4+ recovery data. Using a semi-mechanistic population model, we were able to determine the effect of aging on naïve T-cell dynamics, and to our knowledge, this is the first time this relationship was observed in HIV-infected patients. Though the exact mechanism is not known, our study may stimulate future investigations into the impact of aging on T-cell dynamics in HIV-infected patients. We included multiple immune parameters and their changes in relation to age, data that informed the potential roles of these parameters in CD4+ T-cell dynamics, and allowed us to correct for potential confounding effects. We performed the analysis using data from two studies with long-term and short-term follow-up, which effectively informed different phases of CD4+ T-cell recovery that do not exist in a single study. The data from the ACTG study cover the CD4+ T-cell trajectory with the longest study period reported in the literature thus far (up to 15 years), which provided a robust perspective of the steady-state CD4+ T-cell counts in the HIV-infected population on ART and supported predictions of the long-term trajectory with more confidence. The intensive biomarker data available in the BLIR study added to the granularity of early stage of immune recovery when CD4+ T-cell reconstitution undergoes the greatest changes.

On the other hand, our analysis also has some limitations. Our analysis is retrospective, and the missing information in some patients, such as thymus output and immune exhaustion biomarkers, prevented the evaluation of these factors in the model. Also, a large portion of our studied population was under 50 years old, and we did not have many patients with more advanced age (above 65 years) at ART initiation. The pre-specified biomarkers for division of naïve and memory T-cell were CD45RA+/CCR7+, however, due to assay issues, the CCR7 data were not available. We did not include a common marker of immune aging, the CD4:CD8 ratio, due to potential issues with collinearity with the model structure. Our study sample size was relatively small, which limited the generalizability of our conclusions; and these data largely came from patients initiating treatment at lower CD4 counts with older ART regimens. Current HIV treatment guidelines now recommend treatment initiation immediately upon diagnosis regardless of CD4+ T-cell count, with more potent, better tolerated regimens; therefore, these finding may not be generalizable to aging patients who have initiated treatment in the last 5 years. As long-term immune recovery data from people living with HIV treated earlier with newer regimens become available, this model can be further refined and adapted.

In summary, we developed a population model describing longitudinal CD4+ T-cell recovery in HIV-infected patient with successful viral suppression under ART. Our analysis revealed the association between older age and impaired naïve T-cell recovery and the negative effect of aging on long-term total CD4+ T-cell reconstitution. Our preliminary analysis shed lights on the role of immune exhaustion on CD4+ T-cell dynamics as well as the association between higher thymus output and naïve T-cell generation. Further analysis will require more subjects in which these biomarkers were measured to validate our findings.

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